Specific Software on the HPC

The pages under this section describe some of the disipline specific software installed on the cluster such as genomics or physics software.

Software comes from prepackaged software for the Centos 8 distribution and the repository “Extra Packages for Enterprise Linux”.
In addition eResearch has its own repository of software compiled and installed by eResearch which is installed under /shared/opt.

All installed software can be found by querying the DNF package manager: dnf list installed | grep software_name where software_name is what you are looking for such as “atlas” or “python”.

You can search for available packages using dnf search software_name. looking for such as “sqlite” or “sequence” or “alignment”. The search will also search in the package description field.

For a more comprehensive list of the software install on this HPC see this Software List.

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